All Projects

We develop software for a wide range of research topics, at different timescales and levels of complexity, and using a variety of technical solutions and programming languages, but always with a focus on sustainable software development. Our projects fall into four main categories:

Funded Projects Software
Development as part of externally funded projects
Open Call Projects
Software development projects from our annual Open Call
Small Scale Projects
Small scale software development projects
Open source contributions
Our open source projects and contributions to the open source community

Projects

Table filters

Table


Hamming distance project High performance implementation of a critical step in an analysis pipeline	maths	Small Scale Project	2020
Jove matrix performance project	chemistry	Small Scale Project	2020
Systems biology parameter estimation GUI Extend parameter fitting functionality and integrate into the existing GUI application	Biology	Small Scale Project	2021
Jupyter-based course material for a C++ framework Based on the Jupyter kernel xeus-cling, C++ course materials are rewritten as Jupyter notebooks.	maths	Small Scale Project	2021
SSC Spack repository Packaging Software for the HPC package manager “Spack”	physics	Small Scale Project	2021
C++ Interface for HydroSHEDS data Allow access to existing hydrologic datasets through a C++11 interface	maths	Small Scale Project	2021
Misinformation in social networks Extract textual content from images	political science	Small Scale Project	2021
Modern CMake Buildsystem for HyperHDG library Modernization of the build system to follow the latest best practices of CMake	maths	Small Scale Project	2021
Advice on math	medicine	Small Scale Project	2021
IWR Interactive visualization prototype An interactive web presentation of the IWR and its members	computing	Small Scale Project	2022
Mobile phone localization project Analyses raw mobile phone data and produces a mobility network between antennas	geography	Small Scale Project	2022
Email anonymization Tool to parse email body from email text and retains only the anonymized salutation and first sentence	linguistics	Small Scale Project	2022
HeiData integration for Pooch	infrastructure	Small Scale Project	2022
EasyDB GND norm data updater	infrastructure	Small Scale Project	2022
Oxygen video linking of xml annotations	linguistics	Small Scale Project	2022
VINK (Voice to ink) Stand-alone installer for the OpenAI Whisper transcription tool	linguistics	Small Scale Project	2022
EasyDB Zotero integration plugin	infrastructure	Small Scale Project	2023
Interactive Network Visualization for Art Exhibition Interactive network visualization to be used on a touch screen device in the art exhibition “THE SOCIAL NETWORK. Die Gästebücher des Kunstsammlers Franz Moufang” in Kunstverein Heidelberg	art history	Small Scale Project	2023
Color Detection Module in ammico	art history	Small Scale Project	2023
Packaging of Analysis Workflow for CNSR Core Facility	neurophysiology	Small Scale Project	2023
Configurable C++ project template Configurable template repository for starting new C++ projects	foss	Open Source Contribution	2021
Python bindings from C++ pybind11 example A simple example of how to provide Python bindings from C++ using pybind11	foss	Open Source Contribution	2021
clang-format Python packaging	foss	Open Source Contribution	2022
Jupyter notebooks as command line applications Turn Jupyter notebooks into command line applications	foss	Open Source Contribution	2022
Jupyter widgets for JSON schemas A widget generator for your Jupyter notebooks	foss	Open Source Contribution	2022
Configurable Python project template Configurable template repository for starting new Python packages	foss	Open Source Contribution	2022
Sphinx extension for large data An extension to the Sphinx documentation system that ensures Git LFS is installed	foss	Open Source Contribution	2022
Github Action to install Mesa3D A Github Action to install Mesa3D on windows CI runners	foss	Open Source Contribution	2022
Github Action to install Doxygen	foss	Open Source Contribution	2023
Jupyter Kernel for Dockerfiles	foss	Open Source Contribution	2023
Automatic generation of GUIs from click CLIs	foss	Open Source Contribution	2023
SIMPA Performance improvements for the toolkit for Simulation and Image Processing for Photonics and Acoustics (SIMPA).	Biophysics	Open Call Project	2023
Refactoring of PoWR code Modernisation of the Potsdam Wolf-Rayet Stellar Atmospheres code.	Astrophysics	Open Call Project	2023
TEDIAS Dashboards and user interfaces for a digital patient admission system	Medical	Funded Project	2023
Ribosome profiling Enhance the quality, portability and maintainability of the ribosome profiling analysis tool rp-bp	Medical	Open Call Project	2022
Parafields Development of an MPI-parallel Python library for the generation of stationary Gaussian fields based on an existing C++ library	Scientific Computing	Open Call Project	2022
Predictive modeling in TB screening	Medical	Open Call Project	2022
Visuomotor Serial Targeting Task (VSTT) Open source software with graphical user interface for designing, running and analyzing visuomotor targeting experiments	Sports Science	Open Call Project	2022
Moralization in written texts Interface to train language models for multi-label token classification	German Studies	Open Call Project	2022
Misinformation campaigns characteristics Open-source software to analyze image and text content of social media posts	Political Science	Open Call Project	2022
Dust polarization observations Improve portability and quality of code and tooling	Astrophysics	Open Call Project	2022
FakeMPI A sequential MPI stub for compiling MPI-parallel applications in sequential contexts	Scientific Computing	Open Source Contribution	2022
Neuroscience data processing and analysis Deploying and improving analysis pipelines on HPC resources	Biology	Open Call Project	2021
Corpus and argumentation Open-source software to automatize annotation and database encoding of linguistic texts	Language Studies	Open Call Project	2021
py4dgeo: Change detection 4D point cloud data Library of algorithms for the spatio-temporal analysis of 3D point cloud data. Provides an extensible, open Python framework based on a high performance C++ core.	Geography	Open Call Project	2021
AFWizard: Adaptive ground point filtering for aerial archaelogy Python framework to facilitate complex ground point filtering workflows in archaeologic prospection	Archaeology	Open Call Project	2021
CircuitSeq Web service for a DNA sequencing service	Medical	Funded Project	2022
CebraEM Quantifying organelle geometry and morphology based on volume electron microscopy data.	Biology	Open Call Project	2023
Spatial Model Editor Extend spatial modelling and simulation software from 2d to 3d	Biology	Funded Project	2023

All Projects

Projects

Table filters

Table

Links

Consultation

Initiate a Project